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  5. Glyma.12G219000

Glyma.12G219000


Description : cyclic nucleotide-gated cation channel 4


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.12G219000
Cluster HCCA clusters: Cluster_376

Target Alias Description ECC score Gene Family Method Actions
A4A49_32794 No alias cyclic nucleotide-gated ion channel 1 0.03 Orthogroups_2024-Update
HORVU1Hr1G066050.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
HORVU5Hr1G049240.3 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
HORVU7Hr1G079410.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
evm.model.tig00021244.33 No alias (at4g30560 : 102.0) member of Cyclic nucleotide gated... 0.02 Orthogroups_2024-Update
evm.model.tig00021348.58 No alias (at1g19780 : 96.3) member of Cyclic nucleotide gated... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 81 412
IPR000595 cNMP-bd_dom 506 594
No external refs found!