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  5. Sopen10g003190

Sopen10g003190


Description : MatE


Gene families : OG_42_0000106 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g003190
Cluster HCCA clusters: Cluster_394

Target Alias Description ECC score Gene Family Method Actions
Brara.I04943.1 No alias metabolite transporter *(DTX) 0.05 Orthogroups_2024-Update
Glyma.13G275500 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
Glyma.20G123300 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Sobic.002G311200.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Sopen02g035720 No alias MatE 0.02 Orthogroups_2024-Update
evm.model.contig_481.15 No alias (at1g71140 : 172.0) MATE efflux family protein;... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006855 drug transmembrane transport IEA InterProScan predictions
MF GO:0015238 drug transmembrane transporter activity IEA InterProScan predictions
MF GO:0015297 antiporter activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002528 MATE_fam 2 96
IPR002528 MATE_fam 159 320
No external refs found!