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  5. Glyma.12G242300

Glyma.12G242300


Description : dynamin-like 3


Gene families : OG_42_0002407 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002407_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.12G242300
Cluster HCCA clusters: Cluster_317

Target Alias Description ECC score Gene Family Method Actions
171046 No alias dynamin-like protein 6 0.03 Orthogroups_2024-Update
77824 No alias dynamin-like 3 0.03 Orthogroups_2024-Update
At1g59610 No alias Dynamin-2B [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ55] 0.03 Orthogroups_2024-Update
Bradi1g44440 No alias dynamin-like 3 0.07 Orthogroups_2024-Update
Bradi3g59800 No alias dynamin-like protein 6 0.04 Orthogroups_2024-Update
Glyma.07G273100 No alias dynamin-like 3 0.03 Orthogroups_2024-Update
MA_10433644g0010 No alias (at1g59610 : 620.0) A high molecular weight GTPase whose... 0.06 Orthogroups_2024-Update
Mp4g06320.1 No alias DRP2-type clathrin coated vesicle dynamin 0.02 Orthogroups_2024-Update
PSME_00005336-RA No alias (at1g10290 : 1020.0) involved in trafficking from the... 0.05 Orthogroups_2024-Update
Pp1s38_177V6 No alias T30E16.17; dynamin-like protein, putative (ADL3)... 0.03 Orthogroups_2024-Update
Pp1s426_19V6 No alias T30E16.17; dynamin-like protein, putative (ADL3)... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
InterPro domains Description Start Stop
IPR000375 Dynamin_central 260 496
IPR001849 PH_domain 582 700
IPR022812 Dynamin_SF 41 205
IPR003130 GED 738 820
No external refs found!