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Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Glycine release: Glyma.13G001700 | |
| Cluster | HCCA clusters: Cluster_338 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 96927 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| At1g20230 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.03 | Orthogroups_2024-Update | |
| At2g02980 | No alias | Pentatricopeptide repeat-containing protein At2g02980,... | 0.03 | Orthogroups_2024-Update | |
| At2g41080 | No alias | Pentatricopeptide repeat-containing protein At2g41080... | 0.03 | Orthogroups_2024-Update | |
| Bradi1g05610 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Bradi2g06450 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi3g41651 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Bradi3g57730 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Brara.E02152.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.F01240.1 | No alias | RNA editing factor *(CWM1) | 0.03 | Orthogroups_2024-Update | |
| Brara.J00787.1 | No alias | RNA editing factor *(MEF1) | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G367355 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G455587 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU0Hr1G001760.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU1Hr1G093220.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| HORVU7Hr1G084980.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| LOC_Os03g58100 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os07g05560 | No alias | expressed protein | 0.02 | Orthogroups_2024-Update | |
| LOC_Os07g20420 | No alias | tetratricopeptide-like helical, putative, expressed | 0.04 | Orthogroups_2024-Update | |
| LOC_Os08g28830 | No alias | pentatricopeptide, putative, expressed | 0.04 | Orthogroups_2024-Update | |
| LOC_Os10g34720 | No alias | LOI1, putative, expressed | 0.04 | Orthogroups_2024-Update | |
| LOC_Os10g39460 | No alias | selenium-binding protein-like, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_385322g0010 | No alias | (at1g08070 : 385.0) Encodes a chloroplast RNA editing... | 0.03 | Orthogroups_2024-Update | |
| PSME_00026226-RA | No alias | (at3g46790 : 588.0) Encodes a member of a PCMP (plant... | 0.02 | Orthogroups_2024-Update | |
| PSME_00034005-RA | No alias | (at3g23330 : 585.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
| Potri.004G184800 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Solyc02g081900 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Sopen01g003390 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
| Sopen06g035950 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003725 | double-stranded RNA binding | IEP | Predicted GO |
| MF | GO:0005524 | ATP binding | IEP | Predicted GO |
| BP | GO:0006298 | mismatch repair | IEP | Predicted GO |
| BP | GO:0007034 | vacuolar transport | IEP | Predicted GO |
| MF | GO:0008144 | drug binding | IEP | Predicted GO |
| MF | GO:0010011 | auxin binding | IEP | Predicted GO |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Predicted GO |
| MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
| MF | GO:0030983 | mismatched DNA binding | IEP | Predicted GO |
| MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
| MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
| MF | GO:0042562 | hormone binding | IEP | Predicted GO |
| MF | GO:0043167 | ion binding | IEP | Predicted GO |
| MF | GO:0043168 | anion binding | IEP | Predicted GO |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
| No external refs found! |