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  5. Glyma.13G005800

Glyma.13G005800


Description : Leucine-rich repeat (LRR) family protein


Gene families : OG_42_0001859 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001859_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G005800
Cluster HCCA clusters: Cluster_333

Target Alias Description ECC score Gene Family Method Actions
233681 No alias Leucine-rich repeat (LRR) family protein 0.02 Orthogroups_2024-Update
444337 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
At1g03440 No alias Leucine-rich repeat (LRR) family protein... 0.04 Orthogroups_2024-Update
Glyma.03G148500 No alias RNI-like superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os06g28480 No alias polygalacturonase inhibitor 1 precursor, putative, expressed 0.02 Orthogroups_2024-Update
Potri.004G001000 No alias Leucine-rich repeat (LRR) family protein 0.02 Orthogroups_2024-Update
Potri.014G136100 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
Solyc06g084420 No alias Leucine-rich repeat receptor-like kinase (AHRD V3.3 ***... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 28 70
IPR001611 Leu-rich_rpt 125 183
No external refs found!