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  5. Glyma.13G027700

Glyma.13G027700


Description : ortholog of human splicing factor SC35


Gene families : OG_42_0009749 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009749_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G027700
Cluster HCCA clusters: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Glyma.02G165100 No alias ortholog of human splicing factor SC35 0.04 Orthogroups_2024-Update
Glyma.02G165200 No alias ortholog of human splicing factor SC35 0.03 Orthogroups_2024-Update
Glyma.05G115300 No alias Function unknown 0.04 Orthogroups_2024-Update
Glyma.16G096100 No alias Function unknown 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR025558 DUF4283 497 600
IPR000504 RRM_dom 325 389
IPR000504 RRM_dom 166 224
No external refs found!