Glyma.13G040400

Description : cytokinin response factor 4

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.13G040400
Cluster	HCCA clusters: Cluster_128

Target	Alias	Description	ECC score	Gene Family Method
68470	No alias	ethylene responsive element binding factor 1	0.02	Orthogroups_2024-Update
A4A49_06467	No alias	ethylene-responsive transcription factor crf4	0.03	Orthogroups_2024-Update
A4A49_13998	No alias	ethylene-responsive transcription factor 4	0.03	Orthogroups_2024-Update
A4A49_16244	No alias	ethylene-responsive transcription factor rap2-11	0.04	Orthogroups_2024-Update
A4A49_20188	No alias	ethylene-responsive transcription factor erf062	0.03	Orthogroups_2024-Update
A4A49_23921	No alias	ethylene-responsive transcription factor erf034	0.02	Orthogroups_2024-Update
At1g28160	No alias	Ethylene-responsive transcription factor ERF087...	0.03	Orthogroups_2024-Update
At1g44830	No alias	Ethylene-responsive transcription factor ERF014...	0.03	Orthogroups_2024-Update
Bradi3g12680	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi4g29010	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Brara.I05105.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.I05601.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
Brara.J02507.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G053503	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
GRMZM2G175543	No alias	ethylene responsive element binding factor 4	0.02	Orthogroups_2024-Update
GRMZM2G425798	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.02G006200	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Glyma.02G066200	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.03G162400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.05G228100	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.06G290000	No alias	erf domain protein 9	0.04	Orthogroups_2024-Update
Glyma.09G233800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.11G036500	No alias	ethylene responsive element binding factor 1	0.03	Orthogroups_2024-Update
Glyma.13G216900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.13G233900	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Glyma.15G077000	No alias	ERF domain protein 12	0.03	Orthogroups_2024-Update
Glyma.17G194100	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.18G252400	No alias	ethylene-responsive element binding factor 13	0.05	Orthogroups_2024-Update
Glyma.19G164100	No alias	ethylene response factor 1	0.02	Orthogroups_2024-Update
HORVU6Hr1G074970.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
HORVU6Hr1G090800.2	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.03	Orthogroups_2024-Update
LOC_Os04g52090	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os08g43210	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os10g41130	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_10433094g0010	No alias	(at1g74930 : 123.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_175747g0010	No alias	(at1g74930 : 119.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_184464g0010	No alias	(at4g17500 : 88.2) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
MA_2446g0010	No alias	(at2g20880 : 136.0) Integrase-type DNA-binding...	0.02	Orthogroups_2024-Update
MA_426919g0010	No alias	(at1g19210 : 109.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_5805979g0010	No alias	(at4g17500 : 88.2) Encodes a member of the ERF (ethylene...	0.04	Orthogroups_2024-Update
MA_65190g0010	No alias	(at5g19790 : 91.3) encodes a member of the ERF (ethylene...	0.04	Orthogroups_2024-Update
MA_8384767g0010	No alias	(at1g33760 : 124.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_891091g0010	No alias	(at4g17500 : 92.0) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
Mp1g20040.1	No alias	transcription factor (ERF)	0.03	Orthogroups_2024-Update
Mp7g09350.1	No alias	transcription factor (ERF)	0.03	Orthogroups_2024-Update
PSME_00005187-RA	No alias	(at4g17500 : 144.0) Encodes a member of the ERF...	0.04	Orthogroups_2024-Update
PSME_00008891-RA	No alias	(at4g17500 : 93.6) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
PSME_00041310-RA	No alias	(at1g75490 : 82.8) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
Potri.001G079800	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Potri.001G154200	No alias	ethylene responsive element binding factor 5	0.03	Orthogroups_2024-Update
Potri.003G050700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.006G138900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.006G218200	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.007G138100	No alias	erf domain protein 9	0.03	Orthogroups_2024-Update
Potri.009G101900	No alias	redox responsive transcription factor 1	0.04	Orthogroups_2024-Update
Potri.012G134100	No alias	C-repeat-binding factor 4	0.03	Orthogroups_2024-Update
Potri.018G028000	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Potri.018G085700	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.019G073300	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Pp1s487_24V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.1G196400.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Seita.3G191900.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Seita.7G081300.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Seita.7G205200.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.002G139400.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G168000.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G170100.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
Solyc03g124110	No alias	CBF	0.03	Orthogroups_2024-Update
Solyc06g065820	No alias	Ethylene Response Factor H.1	0.03	Orthogroups_2024-Update
Solyc08g078190	No alias	ethylene-responsive transcription factor	0.02	Orthogroups_2024-Update
Solyc12g056980	No alias	Ethylene-responsive element binding-factor (AHRD V3.3...	0.02	Orthogroups_2024-Update
Sopen08g030500	No alias	AP2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0030001	metal ion transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	107	156

External Links

No external refs found!

Glyma.13G040400

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation