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  5. Glyma.13G054600

Glyma.13G054600


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0002920 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002920_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G054600
Cluster HCCA clusters: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Brara.A01088.1 No alias polygalacturonase *(QRT3) 0.03 Orthogroups_2024-Update
PSME_00024038-RA No alias (at4g20050 : 487.0) Encodes a polygalacturonase that... 0.03 Orthogroups_2024-Update
Seita.7G234500.1 No alias polygalacturonase *(QRT3) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR024535 Pectate_lyase_SF_prot 86 307
No external refs found!