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  5. Glyma.13G055700

Glyma.13G055700


Description : Function unknown


Gene families : OG_42_0002155 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002155_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G055700
Cluster HCCA clusters: Cluster_340

Target Alias Description ECC score Gene Family Method Actions
A4A49_25826 No alias protein longifolia 1 0.04 Orthogroups_2024-Update
At1g74160 No alias LONGIFOLIA protein [Source:UniProtKB/TrEMBL;Acc:Q0WNQ5] 0.04 Orthogroups_2024-Update
Brara.B02109.1 No alias component *(TRM) of TON1-TRM-PP2A (TTP) preprophase band... 0.03 Orthogroups_2024-Update
Glyma.05G019800 No alias Function unknown 0.05 Orthogroups_2024-Update
Glyma.18G268900 No alias Function unknown 0.07 Orthogroups_2024-Update
PSME_00026912-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Seita.2G142200.1 No alias component *(TRM) of TON1-TRM-PP2A (TTP) preprophase band... 0.04 Orthogroups_2024-Update
Solyc03g115000 No alias Longifolia protein (AHRD V3.3 *** A0A072UUU5_MEDTR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
CC GO:0005666 RNA polymerase III complex IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006383 transcription by RNA polymerase III IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR025486 DUF4378 790 964
No external refs found!