Glyma.13G060600

Description : related to AP2 11

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.13G060600
Cluster	HCCA clusters: Cluster_131

Target	Alias	Description	ECC score	Gene Family Method
A4A49_03112	No alias	ethylene-responsive transcription factor crf4	0.02	Orthogroups_2024-Update
A4A49_15089	No alias	dehydration-responsive element-binding protein 3	0.03	Orthogroups_2024-Update
A4A49_17723	No alias	ethylene-responsive transcription factor 1	0.06	Orthogroups_2024-Update
A4A49_20188	No alias	ethylene-responsive transcription factor erf062	0.02	Orthogroups_2024-Update
A4A49_23010	No alias	ethylene-responsive transcription factor 2	0.04	Orthogroups_2024-Update
A4A49_24642	No alias	ethylene-responsive transcription factor rap2-11	0.02	Orthogroups_2024-Update
A4A49_28100	No alias	ethylene-responsive transcription factor erf017	0.04	Orthogroups_2024-Update
A4A49_28228	No alias	ethylene-responsive transcription factor erf017	0.02	Orthogroups_2024-Update
A4A49_33000	No alias	ethylene-responsive transcription factor 14	0.02	Orthogroups_2024-Update
A4A49_40581	No alias	ethylene-responsive transcription factor erf106	0.03	Orthogroups_2024-Update
A4A49_42088	No alias	ethylene-responsive transcription factor 13	0.02	Orthogroups_2024-Update
A4A49_42290	No alias	ethylene-responsive transcription factor rap2-4	0.02	Orthogroups_2024-Update
At1g01250	No alias	Ethylene-responsive transcription factor ERF023...	0.03	Orthogroups_2024-Update
At2g35700	No alias	ERF38 [Source:UniProtKB/TrEMBL;Acc:A0A178VWJ3]	0.03	Orthogroups_2024-Update
At3g14230	No alias	Ethylene-responsive transcription factor RAP2-2...	0.03	Orthogroups_2024-Update
Bradi1g23756	No alias	related to AP2 11	0.02	Orthogroups_2024-Update
Bradi2g22505	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi2g60340	No alias	C-repeat/DRE binding factor 2	0.04	Orthogroups_2024-Update
Bradi3g12680	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi3g18070	No alias	ethylene response factor 7	0.02	Orthogroups_2024-Update
Brara.D02156.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
Brara.I01326.1	No alias	subgroup ERF-I transcription factor	0.06	Orthogroups_2024-Update
Brara.J00758.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Cre06.g275500	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.02G006200	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Glyma.05G015900	No alias	related to AP2 11	0.04	Orthogroups_2024-Update
Glyma.06G163700	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.08G020900	No alias	cytokinin response factor 2	0.04	Orthogroups_2024-Update
Glyma.08G145300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.09G242600	No alias	ethylene-responsive element binding factor 13	0.04	Orthogroups_2024-Update
Glyma.10G194200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.18G051500	No alias	cytokinin response factor 4	0.06	Orthogroups_2024-Update
Glyma.20G195900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
HORVU1Hr1G070410.3	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU4Hr1G079630.1	No alias	subgroup ERF-IX transcription factor	0.05	Orthogroups_2024-Update
HORVU6Hr1G062380.3	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
HORVU7Hr1G088790.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
LOC_Os01g21120	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os02g43970	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os03g08470	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g25260	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g27930	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os08g45110	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_1037g0020	No alias	(at1g74930 : 134.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_329325g0010	No alias	(at4g17500 : 94.0) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
PSME_00037661-RA	No alias	(at4g17500 : 149.0) Encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00050761-RA	No alias	(at1g15360 : 129.0) Encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00051454-RA	No alias	(at1g19210 : 98.6) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00052064-RA	No alias	(at5g21960 : 132.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
Potri.001G154200	No alias	ethylene responsive element binding factor 5	0.02	Orthogroups_2024-Update
Potri.003G050700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.T050600	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Seita.1G248300.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Seita.1G257300.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Seita.2G215500.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
Seita.2G276200.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Seita.4G222600.1	No alias	cutin and suberin biosynthesis transcription factor...	0.03	Orthogroups_2024-Update
Seita.8G237900.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.9G455400.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.001G428700.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.001G481300.1	No alias	subgroup ERF-VII transcription factor	0.04	Orthogroups_2024-Update
Sobic.002G115400.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Sobic.002G139400.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.004G297100.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.005G103100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.010G164800.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
Solyc02g093130	No alias	AP2/EREBP transcription factor_1	0.03	Orthogroups_2024-Update
Solyc03g026270	No alias	CBF	0.03	Orthogroups_2024-Update
Solyc05g052030	No alias	ethylene response factor 4	0.03	Orthogroups_2024-Update
Solyc06g051840	No alias	Solanum lycopersicum Cytokinin Response Factor 6	0.03	Orthogroups_2024-Update
Solyc08g078420	No alias	ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc12g056980	No alias	Ethylene-responsive element binding-factor (AHRD V3.3...	0.03	Orthogroups_2024-Update
Sopen02g037700	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen03g005160	No alias	hypothetical protein	0.03	Orthogroups_2024-Update
Sopen06g018310	No alias	AP2 domain	0.04	Orthogroups_2024-Update
Sopen12g001920	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	Predicted GO
BP	GO:0006259	DNA metabolic process	IEP	Predicted GO
BP	GO:0006281	DNA repair	IEP	Predicted GO
BP	GO:0006284	base-excision repair	IEP	Predicted GO
BP	GO:0006298	mismatch repair	IEP	Predicted GO
BP	GO:0006950	response to stress	IEP	Predicted GO
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Predicted GO
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Predicted GO
MF	GO:0019104	DNA N-glycosylase activity	IEP	Predicted GO
MF	GO:0030983	mismatched DNA binding	IEP	Predicted GO
BP	GO:0033554	cellular response to stress	IEP	Predicted GO
BP	GO:0050896	response to stimulus	IEP	Predicted GO
BP	GO:0051716	cellular response to stimulus	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	42	91

External Links

No external refs found!

Glyma.13G060600

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation