1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.13G062400

Glyma.13G062400


Description : Reticulon family protein


Gene families : OG_42_0000160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G062400
Cluster HCCA clusters: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
96839 No alias Reticulon family protein 0.04 Orthogroups_2024-Update
At1g68230 No alias Reticulon-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178WQE6] 0.04 Orthogroups_2024-Update
Brara.G02772.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.03 Orthogroups_2024-Update
Glyma.07G097100 No alias Reticulon family protein 0.05 Orthogroups_2024-Update
Glyma.20G128900 No alias Reticulon family protein 0.04 Orthogroups_2024-Update
LOC_Os01g12650 No alias reticulon domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G097700 No alias Reticulan like protein B3 0.06 Orthogroups_2024-Update
Pp1s421_1V6 No alias seed maturation protein 0.03 Orthogroups_2024-Update
Seita.3G171600.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.03 Orthogroups_2024-Update
Seita.5G095900.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.03 Orthogroups_2024-Update
Seita.5G383400.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.04 Orthogroups_2024-Update
Sobic.003G011100.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.02 Orthogroups_2024-Update
Sobic.009G260000.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.06 Orthogroups_2024-Update
Sopen05g004640 No alias Reticulon 0.02 Orthogroups_2024-Update
Sopen06g012170 No alias Reticulon 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0006163 purine nucleotide metabolic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009150 purine ribonucleotide metabolic process IEP Predicted GO
BP GO:0009259 ribonucleotide metabolic process IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0072521 purine-containing compound metabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003388 Reticulon 14 167
No external refs found!