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  5. Sopen10g003840

Sopen10g003840


Description : WRKY DNA -binding domain


Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g003840
Cluster HCCA clusters: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Brara.I00100.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I02860.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.07G023300 No alias WRKY DNA-binding protein 40 0.02 Orthogroups_2024-Update
PSME_00025597-RA No alias (at1g29280 : 167.0) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
PSME_00047222-RA No alias (at4g04450 : 178.0) member of WRKY Transcription Factor;... 0.02 Orthogroups_2024-Update
PSME_00053709-RA No alias (at5g41570 : 93.6) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
Potri.011G070100 No alias WRKY DNA-binding protein 65 0.03 Orthogroups_2024-Update
Pp1s426_30V6 No alias wrky transcription factor 6 0.03 Orthogroups_2024-Update
Seita.5G365500.1 No alias transcription factor *(WRKY33) & WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.6G218000.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.8G013000.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G227300.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G212800.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G234100.1 No alias WRKY-type transcription factor 0.04 Orthogroups_2024-Update
Solyc09g010960 No alias WRKY transcription factor 49 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003657 WRKY_dom 92 149
No external refs found!