Sopen10g004000

Description : RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

Gene families : OG_42_0004646 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004646_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen10g004000
Cluster	HCCA clusters: Cluster_124

Target	Alias	Description	ECC score	Gene Family Method
Cre06.g264500	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.02	Orthogroups_2024-Update
HORVU2Hr1G021960.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Kfl00050_0070	kfl00050_0070_v1....	(at3g56510 : 223.0) RNA-binding (RRM/RBD/RNP motifs)...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	43	121

External Links

No external refs found!