1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.13G097400

Glyma.13G097400


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_42_0003452 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G097400
Cluster HCCA clusters: Cluster_289

Target Alias Description ECC score Gene Family Method Actions
Bradi4g02100 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Cre04.g215350 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Kfl00057_0170 kfl00057_0170_v1.1 (at2g18900 : 324.0) Transducin/WD40 repeat-like... 0.04 Orthogroups_2024-Update
Pp1s207_6V6 No alias F19F24.10; transducin family protein / WD-40 repeat... 0.03 Orthogroups_2024-Update
Seita.3G384700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G163500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc07g066410 No alias Transducin/WD-like repeat-protein (AHRD V3.3 *** G7JUE1_MEDTR) 0.03 Orthogroups_2024-Update
Sopen07g034580 No alias WD domain, G-beta repeat 0.04 Orthogroups_2024-Update
evm.model.contig_2673.3 No alias (at2g18900 : 111.0) Transducin/WD40 repeat-like... 0.03 Orthogroups_2024-Update
evm.model.tig00020554.131 No alias (at3g26480 : 124.0) Transducin family protein / WD-40... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004797 thymidine kinase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006333 chromatin assembly or disassembly IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009143 nucleoside triphosphate catabolic process IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019136 deoxynucleoside kinase activity IEP Predicted GO
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predicted GO
MF GO:0019206 nucleoside kinase activity IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 274 303
IPR001680 WD40_repeat 39 79
No external refs found!