Sopen10g004080

Description : NB-ARC domain

Gene families : OG_42_0000068 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen10g004080
Cluster	HCCA clusters: Cluster_388

Target	Alias	Description	ECC score	Gene Family Method
AC203972.3_FG001	No alias	NB-ARC domain-containing disease resistance protein	0.02	Orthogroups_2024-Update
Bradi2g39847	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Glyma.01G010700	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Glyma.12G011700	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Glyma.20G041300	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.03	Orthogroups_2024-Update
HORVU3Hr1G001510.3	No alias	Unknown function	0.03	Orthogroups_2024-Update
LOC_Os11g12320	No alias	disease resistance protein RPM1, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os12g14330	No alias	disease resistance protein RPM1, putative, expressed	0.02	Orthogroups_2024-Update
Potri.003G099150	No alias	NB-ARC domain-containing disease resistance protein	0.02	Orthogroups_2024-Update
Seita.8G090200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.005G092600.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.006G168500.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Solyc01g090430	No alias	NRC1	0.03	Orthogroups_2024-Update
Sopen12g032730	No alias	NB-ARC domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	162	398

External Links

No external refs found!