Glyma.13G107900

Description : nuclear factor Y, subunit A3

Gene families : OG_42_0000352 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000352_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.13G107900
Cluster	HCCA clusters: Cluster_493

Target	Alias	Description	ECC score	Gene Family Method
At1g30500	No alias	Nuclear transcription factor Y subunit A-7...	0.03	Orthogroups_2024-Update
At3g14020	No alias	Nuclear transcription factor Y subunit A-6...	0.03	Orthogroups_2024-Update
At3g20910	No alias	Nuclear transcription factor Y subunit A-9...	0.03	Orthogroups_2024-Update
Brara.A03708.1	No alias	component *(NF-YA) of NF-Y transcription factor complex	0.03	Orthogroups_2024-Update
Brara.E01518.1	No alias	component *(NF-YA) of NF-Y transcription factor complex	0.03	Orthogroups_2024-Update
Brara.H00096.1	No alias	component *(NF-YA) of NF-Y transcription factor complex	0.03	Orthogroups_2024-Update
Brara.I04819.1	No alias	component *(NF-YA) of NF-Y transcription factor complex	0.03	Orthogroups_2024-Update
GRMZM2G038303	No alias	nuclear factor Y, subunit A3	0.03	Orthogroups_2024-Update
Glyma.09G068400	No alias	nuclear factor Y, subunit A3	0.03	Orthogroups_2024-Update
Glyma.15G129900	No alias	nuclear factor Y, subunit A7	0.03	Orthogroups_2024-Update
LOC_Os03g07880	No alias	nuclear transcription factor Y subunit, putative, expressed	0.03	Orthogroups_2024-Update
MA_72133g0010	No alias	"(at1g72830 : 152.0) Encodes a subunit of CCAAT-binding...	0.04	Orthogroups_2024-Update
Seita.1G338100.1	No alias	component *(NF-YA) of NF-Y transcription factor complex	0.02	Orthogroups_2024-Update
Sobic.001G127800.1	No alias	component *(NF-YA) of NF-Y transcription factor complex	0.02	Orthogroups_2024-Update
Sobic.001G486000.1	No alias	component *(NF-YA) of NF-Y transcription factor complex	0.03	Orthogroups_2024-Update
Sopen02g019020	No alias	CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B	0.03	Orthogroups_2024-Update
Sopen12g003980	No alias	CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Predicted GO
MF	GO:0004888	transmembrane signaling receptor activity	IEP	Predicted GO
MF	GO:0004970	ionotropic glutamate receptor activity	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
MF	GO:0005230	extracellular ligand-gated ion channel activity	IEP	Predicted GO
CC	GO:0005575	cellular_component	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
BP	GO:0006417	regulation of translation	IEP	Predicted GO
BP	GO:0006448	regulation of translational elongation	IEP	Predicted GO
BP	GO:0006449	regulation of translational termination	IEP	Predicted GO
BP	GO:0006452	translational frameshifting	IEP	Predicted GO
BP	GO:0006810	transport	IEP	Predicted GO
BP	GO:0006887	exocytosis	IEP	Predicted GO
MF	GO:0008066	glutamate receptor activity	IEP	Predicted GO
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Predicted GO
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Predicted GO
BP	GO:0009893	positive regulation of metabolic process	IEP	Predicted GO
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Predicted GO
BP	GO:0010608	posttranscriptional regulation of gene expression	IEP	Predicted GO
BP	GO:0010628	positive regulation of gene expression	IEP	Predicted GO
MF	GO:0015267	channel activity	IEP	Predicted GO
MF	GO:0015276	ligand-gated ion channel activity	IEP	Predicted GO
BP	GO:0015696	ammonium transport	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
MF	GO:0022803	passive transmembrane transporter activity	IEP	Predicted GO
MF	GO:0022824	transmitter-gated ion channel activity	IEP	Predicted GO
MF	GO:0022834	ligand-gated channel activity	IEP	Predicted GO
MF	GO:0022835	transmitter-gated channel activity	IEP	Predicted GO
MF	GO:0022836	gated channel activity	IEP	Predicted GO
MF	GO:0022839	ion gated channel activity	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
MF	GO:0030594	neurotransmitter receptor activity	IEP	Predicted GO
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Predicted GO
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Predicted GO
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Predicted GO
BP	GO:0032270	positive regulation of cellular protein metabolic process	IEP	Predicted GO
BP	GO:0032940	secretion by cell	IEP	Predicted GO
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Predicted GO
BP	GO:0034250	positive regulation of cellular amide metabolic process	IEP	Predicted GO
MF	GO:0038023	signaling receptor activity	IEP	Predicted GO
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Predicted GO
MF	GO:0043022	ribosome binding	IEP	Predicted GO
BP	GO:0043243	positive regulation of protein complex disassembly	IEP	Predicted GO
BP	GO:0043244	regulation of protein complex disassembly	IEP	Predicted GO
MF	GO:0044877	protein-containing complex binding	IEP	Predicted GO
BP	GO:0045727	positive regulation of translation	IEP	Predicted GO
BP	GO:0045901	positive regulation of translational elongation	IEP	Predicted GO
BP	GO:0045905	positive regulation of translational termination	IEP	Predicted GO
BP	GO:0046903	secretion	IEP	Predicted GO
BP	GO:0048518	positive regulation of biological process	IEP	Predicted GO
BP	GO:0048522	positive regulation of cellular process	IEP	Predicted GO
BP	GO:0051128	regulation of cellular component organization	IEP	Predicted GO
BP	GO:0051130	positive regulation of cellular component organization	IEP	Predicted GO
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0051179	localization	IEP	Predicted GO
BP	GO:0051234	establishment of localization	IEP	Predicted GO
BP	GO:0051246	regulation of protein metabolic process	IEP	Predicted GO
BP	GO:0051247	positive regulation of protein metabolic process	IEP	Predicted GO
MF	GO:0060089	molecular transducer activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001289	NFYA	75	129

External Links

No external refs found!

Glyma.13G107900

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation