1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.13G112900

Glyma.13G112900


Description : ARM repeat superfamily protein


Gene families : OG_42_0003160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003160_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G112900
Cluster HCCA clusters: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
A4A49_18493 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Bradi2g61300 No alias ARM repeat superfamily protein 0.07 Orthogroups_2024-Update
Bradi3g60080 No alias ARM repeat superfamily protein 0.09 Orthogroups_2024-Update
Brara.A01364.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Brara.C01737.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.E00990.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Cre19.g751197 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G082340.1 No alias Unknown function 0.07 Orthogroups_2024-Update
MA_242029g0010 No alias (at2g34357 : 275.0) ARM repeat superfamily protein;... 0.02 Orthogroups_2024-Update
Potri.006G050000 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Pp1s7_96V6 No alias pre-rrna processing protein 0.06 Orthogroups_2024-Update
Seita.1G341700.1 No alias Unknown function 0.13 Orthogroups_2024-Update
Seita.5G459200.1 No alias Unknown function 0.12 Orthogroups_2024-Update
Sobic.004G320500.1 No alias Unknown function 0.08 Orthogroups_2024-Update
Solyc04g015940 No alias ARM repeat superfamily protein (AHRD V3.3 *** AT4G23540.1) 0.05 Orthogroups_2024-Update
Sopen04g007950 No alias NUC173 domain 0.08 Orthogroups_2024-Update
Sopen07g021980 No alias NUC173 domain 0.03 Orthogroups_2024-Update
evm.model.contig_2349.3 No alias (at2g34357 : 101.0) ARM repeat superfamily protein;... 0.02 Orthogroups_2024-Update
evm.model.tig00020554.42 No alias (at2g34357 : 327.0) ARM repeat superfamily protein;... 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Predicted GO
MF GO:0004003 ATP-dependent DNA helicase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0030488 tRNA methylation IEP Predicted GO
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
MF GO:0032977 membrane insertase activity IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
CC GO:0034457 Mpp10 complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
CC GO:0034708 methyltransferase complex IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
MF GO:0043138 3'-5' DNA helicase activity IEP Predicted GO
MF GO:0043140 ATP-dependent 3'-5' DNA helicase activity IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0043527 tRNA methyltransferase complex IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044452 nucleolar part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0098599 palmitoyl hydrolase activity IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR012978 Uncharacterised_NUC173 399 601
No external refs found!