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  5. Glyma.13G113700

Glyma.13G113700


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G113700
Cluster HCCA clusters: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
A4A49_15905 No alias putative pectinesterase 8 0.03 Orthogroups_2024-Update
A4A49_28049 No alias putative pectinesterase 8 0.03 Orthogroups_2024-Update
Bradi4g00840 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.I05452.1 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Glyma.01G066000 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.01G066100 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.01G068100 No alias Pectin lyase-like superfamily protein 0.01 Orthogroups_2024-Update
Glyma.02G294700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G060900 No alias pectin methylesterase 31 0.04 Orthogroups_2024-Update
HORVU1Hr1G075860.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
LOC_Os05g44600 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
MA_6149868g0010 No alias (at2g36710 : 275.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
Potri.004G156300 No alias pectinesterase 11 0.03 Orthogroups_2024-Update
Potri.008G104800 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.017G054700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.8G237600.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 40 343
No external refs found!