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  5. Sopen10g004270

Sopen10g004270


Description : F-box domain


Gene families : OG_42_0000102 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g004270
Cluster HCCA clusters: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
A4A49_09431 No alias f-boxkelch-repeat protein 0.03 Orthogroups_2024-Update
A4A49_14296 No alias f-boxkelch-repeat protein 0.03 Orthogroups_2024-Update
Bradi3g56200 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Glyma.05G071700 No alias F-box family protein 0.02 Orthogroups_2024-Update
Glyma.08G352900 No alias F-box family protein 0.03 Orthogroups_2024-Update
Glyma.18G168300 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Glyma.18G274800 No alias F-box family protein 0.02 Orthogroups_2024-Update
Potri.001G181600 No alias F-box and associated interaction domains-containing protein 0.02 Orthogroups_2024-Update
Potri.001G318300 No alias F-box family protein 0.03 Orthogroups_2024-Update
Potri.001G318400 No alias F-box family protein 0.03 Orthogroups_2024-Update
Potri.001G319700 No alias F-box and associated interaction domains-containing protein 0.02 Orthogroups_2024-Update
Potri.002G223000 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Potri.004G000900 No alias F-box and associated interaction domains-containing protein 0.02 Orthogroups_2024-Update
Potri.006G010800 No alias F-box associated ubiquitination effector family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001810 F-box_dom 11 45
IPR006527 F-box-assoc_dom_typ1 213 338
No external refs found!