Glyma.13G119000

Description : P-glycoprotein 11

Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.13G119000
Cluster	HCCA clusters: Cluster_328

Target	Alias	Description	ECC score	Gene Family Method
A4A49_00814	No alias	abc transporter b family member 4	0.03	Orthogroups_2024-Update
Bradi2g47337	No alias	ATP binding cassette subfamily B4	0.02	Orthogroups_2024-Update
Brara.I02993.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
GRMZM2G085111	No alias	P-glycoprotein 21	0.02	Orthogroups_2024-Update
GRMZM2G119894	No alias	P-glycoprotein 21	0.03	Orthogroups_2024-Update
GRMZM5G833207	No alias	ATP binding cassette subfamily B4	0.04	Orthogroups_2024-Update
Glyma.09G206300	No alias	P-glycoprotein 2	0.02	Orthogroups_2024-Update
LOC_Os01g18670	No alias	MDR-like ABC transporter, putative, expressed	0.04	Orthogroups_2024-Update
LOC_Os01g34970	No alias	MDR-like ABC transporter, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os04g38570	No alias	multidrug resistance protein, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os04g40570	No alias	ABC transporter, ATP-binding protein, putative, expressed	0.04	Orthogroups_2024-Update
MA_180044g0010	No alias	(at1g02520 : 1573.0) P-glycoprotein 11 (PGP11);...	0.03	Orthogroups_2024-Update
Potri.011G133800	No alias	P-glycoprotein 18	0.02	Orthogroups_2024-Update
Potri.014G113000	No alias	ATP binding cassette subfamily B4	0.04	Orthogroups_2024-Update
Potri.018G087100	No alias	ABC transporter family protein	0.03	Orthogroups_2024-Update
Pp1s28_282V6	No alias	multidrug pheromone mdr abc transporter family	0.02	Orthogroups_2024-Update
Seita.5G031800.1	No alias	subfamily ABCB transporter	0.04	Orthogroups_2024-Update
Seita.5G189700.1	No alias	subfamily ABCB transporter	0.06	Orthogroups_2024-Update
Seita.5G283700.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
Sobic.003G180400.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Sobic.006G123100.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Solyc06g009290	No alias	ABC transporter B family protein (AHRD V3.3 *** G7IBR0_MEDTR)	0.02	Orthogroups_2024-Update
Sopen09g003060	No alias	ABC transporter transmembrane region	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	Predicted GO
MF	GO:0004222	metalloendopeptidase activity	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
BP	GO:0006508	proteolysis	IEP	Predicted GO
BP	GO:0006631	fatty acid metabolic process	IEP	Predicted GO
BP	GO:0006633	fatty acid biosynthetic process	IEP	Predicted GO
MF	GO:0008233	peptidase activity	IEP	Predicted GO
MF	GO:0008237	metallopeptidase activity	IEP	Predicted GO
MF	GO:0008270	zinc ion binding	IEP	Predicted GO
MF	GO:0008417	fucosyltransferase activity	IEP	Predicted GO
MF	GO:0016872	intramolecular lyase activity	IEP	Predicted GO
CC	GO:0031012	extracellular matrix	IEP	Predicted GO
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Predicted GO
CC	GO:0044421	extracellular region part	IEP	Predicted GO
MF	GO:0046983	protein dimerization activity	IEP	Predicted GO
BP	GO:0065003	protein-containing complex assembly	IEP	Predicted GO
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Predicted GO
BP	GO:0070070	proton-transporting V-type ATPase complex assembly	IEP	Predicted GO
BP	GO:0070071	proton-transporting two-sector ATPase complex assembly	IEP	Predicted GO
BP	GO:0070072	vacuolar proton-transporting V-type ATPase complex assembly	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	469	617
IPR003439	ABC_transporter-like	1127	1275
IPR011527	ABC1_TM_dom	127	401
IPR011527	ABC1_TM_dom	786	1056

External Links

No external refs found!

Glyma.13G119000

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation