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  5. Glyma.13G133900

Glyma.13G133900


Description : Ribosomal L29 family protein


Gene families : OG_42_0001364 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G133900
Cluster HCCA clusters: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
438324 No alias Ribosomal L29 family protein 0.07 Orthogroups_2024-Update
A4A49_28237 No alias 60s ribosomal protein l35-4 0.09 Orthogroups_2024-Update
A4A49_63512 No alias 60s ribosomal protein l35-4 0.08 Orthogroups_2024-Update
At2g39390 No alias 60S ribosomal protein L35-2... 0.04 Orthogroups_2024-Update
Bradi3g43840 No alias Ribosomal L29 family protein 0.04 Orthogroups_2024-Update
Bradi5g07170 No alias Ribosomal L29 family protein 0.09 Orthogroups_2024-Update
Brara.A03526.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.16 Orthogroups_2024-Update
Brara.B00059.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Brara.C02014.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Brara.C03268.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Brara.E03085.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
Cre14.g617900 No alias Ribosomal L29 family protein 0.13 Orthogroups_2024-Update
Kfl00608_0050 kfl00608_0050_v1.1 (at5g02610 : 177.0) Ribosomal L29 family protein ;... 0.08 Orthogroups_2024-Update
LOC_Os02g30050 No alias ribosomal protein L29, putative, expressed 0.02 Orthogroups_2024-Update
Mp6g05620.1 No alias component RPL35 of LSU proteome component 0.03 Orthogroups_2024-Update
PSME_00020825-RA No alias (at5g02610 : 157.0) Ribosomal L29 family protein ;... 0.06 Orthogroups_2024-Update
PSME_00033304-RA No alias (at5g02610 : 177.0) Ribosomal L29 family protein ;... 0.06 Orthogroups_2024-Update
Potri.008G048800 No alias Ribosomal L29 family protein 0.04 Orthogroups_2024-Update
Potri.010G212300 No alias Ribosomal L29 family protein 0.08 Orthogroups_2024-Update
Pp1s102_67V6 No alias 60s ribosomal protein l35 0.12 Orthogroups_2024-Update
Pp1s133_93V6 No alias 60s ribosomal protein l35 0.08 Orthogroups_2024-Update
Pp1s1_489V6 No alias 60s ribosomal protein l35 0.1 Orthogroups_2024-Update
Seita.1G166300.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Seita.7G064700.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.15 Orthogroups_2024-Update
Sobic.004G152400.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
Sobic.004G152700.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.12 Orthogroups_2024-Update
Solyc04g010240 No alias 60S ribosomal protein L35 (AHRD V3.3 *** RL35_EUPES) 0.12 Orthogroups_2024-Update
Solyc05g054810 No alias 60S ribosomal protein L35 (AHRD V3.3 *** RL35_EUPES) 0.13 Orthogroups_2024-Update
Sopen04g005430 No alias Ribosomal L29 protein 0.07 Orthogroups_2024-Update
Sopen05g033280 No alias Ribosomal L29 protein 0.08 Orthogroups_2024-Update
evm.model.contig_654.2 No alias (at5g02610 : 134.0) Ribosomal L29 family protein ;... 0.1 Orthogroups_2024-Update
evm.model.tig00000241.79 No alias (at3g55170 : 158.0) Ribosomal L29 family protein ;... 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 8 64
No external refs found!