Glyma.13G135000

Description : Pentatricopeptide repeat (PPR) superfamily protein

Gene families : OG_42_0010050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010050_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.13G135000
Cluster	HCCA clusters: Cluster_473

Target	Alias	Description	ECC score	Gene Family Method
At2g37310	No alias	Pentatricopeptide repeat-containing protein At2g37310...	0.05	Orthogroups_2024-Update
HORVU4Hr1G057730.2	No alias	Unknown function	0.04	Orthogroups_2024-Update
Potri.006G216100	No alias	Pentatricopeptide repeat (PPR) superfamily protein	0.04	Orthogroups_2024-Update
Sobic.001G412200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0005216	ion channel activity	IEP	Predicted GO
BP	GO:0006325	chromatin organization	IEP	Predicted GO
BP	GO:0006333	chromatin assembly or disassembly	IEP	Predicted GO
MF	GO:0015035	protein disulfide oxidoreductase activity	IEP	Predicted GO
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Predicted GO
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Predicted GO
MF	GO:0022838	substrate-specific channel activity	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	308	331
IPR002885	Pentatricopeptide_repeat	513	536
IPR002885	Pentatricopeptide_repeat	579	606
IPR002885	Pentatricopeptide_repeat	280	305
IPR002885	Pentatricopeptide_repeat	101	124
IPR002885	Pentatricopeptide_repeat	204	251
IPR002885	Pentatricopeptide_repeat	338	380
IPR002885	Pentatricopeptide_repeat	440	485

External Links

No external refs found!