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  5. Glyma.13G141000

Glyma.13G141000


Description : cyclic nucleotide-gated channel 15


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G141000
Cluster HCCA clusters: Cluster_525

Target Alias Description ECC score Gene Family Method Actions
Glyma.07G056400 No alias cyclic nucleotide-gated channel 13 0.03 Orthogroups_2024-Update
HORVU5Hr1G096440.1 No alias temperature sensor protein *(CNGC2) & cyclic... 0.03 Orthogroups_2024-Update
Kfl00018_0440 kfl00018_0440_v1.1 (at4g30360 : 523.0) member of Cyclic nucleotide gated... 0.02 Orthogroups_2024-Update
Potri.001G043900 No alias cyclic nucleotide gated channel 8 0.04 Orthogroups_2024-Update
Potri.006G271050 No alias cyclic nucleotide-gated channel 14 0.03 Orthogroups_2024-Update
Seita.1G014200.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.04 Orthogroups_2024-Update
Seita.2G305500.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Solyc11g069580 No alias Cyclic nucleotide-gated channel (AHRD V3.3 *** A0A0K9PRG4_ZOSMR) 0.04 Orthogroups_2024-Update
Sopen02g031760 No alias Ion transport protein 0.02 Orthogroups_2024-Update
Sopen05g028790 No alias Ion transport protein 0.02 Orthogroups_2024-Update
Sopen07g002590 No alias Ion transport protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 81 401
No external refs found!