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  5. Solyc02g087660

Solyc02g087660


Description : SlPIN8


Gene families : OG_42_0000235 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000235_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g087660
Cluster HCCA clusters: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
119024 No alias Auxin efflux carrier family protein 0.02 Orthogroups_2024-Update
LOC_Os06g44970 No alias auxin efflux carrier component, putative, expressed 0.01 Orthogroups_2024-Update
PSME_00044024-RA No alias (at1g70940 : 589.0) A regulator of auxin efflux and... 0.03 Orthogroups_2024-Update
Potri.010G112800 No alias Auxin efflux carrier family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
InterPro domains Description Start Stop
IPR004776 Mem_trans 9 353
No external refs found!