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  5. Glyma.13G151000

Glyma.13G151000


Description : demeter-like 1


Gene families : OG_42_0001291 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001291_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G151000
Cluster HCCA clusters: Cluster_356

Target Alias Description ECC score Gene Family Method Actions
A4A49_34776 No alias protein ros1 0.05 Orthogroups_2024-Update
At2g36490 No alias Protein ROS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJQ6] 0.03 Orthogroups_2024-Update
At5g04560 No alias Transcriptional activator DEMETER... 0.03 Orthogroups_2024-Update
Kfl00179_0260 kfl00179_0260_v1.1 (at3g10010 : 280.0) Encodes a protein with DNA... 0.02 Orthogroups_2024-Update
Potri.010G234400 No alias HhH-GPD base excision DNA repair family protein 0.03 Orthogroups_2024-Update
Pp1s480_4V6 No alias dna glycosylase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR028924 Perm-CXXC 1811 1843
IPR028925 RRM_DME 1846 1946
No external refs found!