Glyma.13G154900


Description : PIF1 helicase


Gene families : OG_42_0000057 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000057_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G154900
Cluster HCCA clusters: Cluster_543

Target Alias Description ECC score Gene Family Method Actions
Glyma.01G135100 No alias PIF1 helicase 0.03 Orthogroups_2024-Update
Glyma.04G116000 No alias PIF1 helicase 0.03 Orthogroups_2024-Update
Glyma.07G171700 No alias PIF1 helicase 0.03 Orthogroups_2024-Update
Glyma.09G080200 No alias PIF1 helicase 0.03 Orthogroups_2024-Update
Glyma.10G108221 No alias Function unknown 0.04 Orthogroups_2024-Update
Glyma.12G111300 No alias PIF1 helicase 0.03 Orthogroups_2024-Update
Glyma.19G051300 No alias PIF1 helicase 0.03 Orthogroups_2024-Update
LOC_Os11g44014 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Potri.008G167100 No alias PIF1 helicase 0.03 Orthogroups_2024-Update
Seita.3G310800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G402100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G097900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen11g011570 No alias PIF1-like helicase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEA InterProScan predictions
MF GO:0003678 DNA helicase activity IEA InterProScan predictions
BP GO:0006281 DNA repair IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR010285 DNA_helicase_pif1-like 6 95
No external refs found!