Description : PIF1 helicase
Gene families : OG_42_0000057 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000057_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.13G154900 | |
Cluster | HCCA clusters: Cluster_543 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Glyma.01G135100 | No alias | PIF1 helicase | 0.03 | Orthogroups_2024-Update | |
Glyma.04G116000 | No alias | PIF1 helicase | 0.03 | Orthogroups_2024-Update | |
Glyma.07G171700 | No alias | PIF1 helicase | 0.03 | Orthogroups_2024-Update | |
Glyma.09G080200 | No alias | PIF1 helicase | 0.03 | Orthogroups_2024-Update | |
Glyma.10G108221 | No alias | Function unknown | 0.04 | Orthogroups_2024-Update | |
Glyma.12G111300 | No alias | PIF1 helicase | 0.03 | Orthogroups_2024-Update | |
Glyma.19G051300 | No alias | PIF1 helicase | 0.03 | Orthogroups_2024-Update | |
LOC_Os11g44014 | No alias | retrotransposon protein, putative, unclassified, expressed | 0.02 | Orthogroups_2024-Update | |
Potri.008G167100 | No alias | PIF1 helicase | 0.03 | Orthogroups_2024-Update | |
Seita.3G310800.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.5G402100.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.6G097900.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sopen11g011570 | No alias | PIF1-like helicase | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000723 | telomere maintenance | IEA | InterProScan predictions |
MF | GO:0003678 | DNA helicase activity | IEA | InterProScan predictions |
BP | GO:0006281 | DNA repair | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004843 | thiol-dependent ubiquitin-specific protease activity | IEP | Predicted GO |
BP | GO:0006612 | protein targeting to membrane | IEP | Predicted GO |
BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Predicted GO |
BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Predicted GO |
MF | GO:0016846 | carbon-sulfur lyase activity | IEP | Predicted GO |
BP | GO:0045047 | protein targeting to ER | IEP | Predicted GO |
BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Predicted GO |
BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Predicted GO |
MF | GO:1990380 | Lys48-specific deubiquitinase activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR010285 | DNA_helicase_pif1-like | 6 | 95 |
No external refs found! |