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  5. Glyma.13G172800

Glyma.13G172800


Description : RAB GTPase homolog A1F


Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G172800
Cluster HCCA clusters: Cluster_361

Target Alias Description ECC score Gene Family Method Actions
A4A49_26486 No alias ras-related protein ypt3 0.02 Orthogroups_2024-Update
Glyma.11G135400 No alias RAB GTPase homolog A2B 0.03 Orthogroups_2024-Update
HORVU5Hr1G053370.3 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os05g44070 No alias ras-related protein, putative, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR001806 Small_GTPase 15 175
No external refs found!