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  5. Sopen10g004890

Sopen10g004890


Description : AP2 domain


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g004890
Cluster HCCA clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
A4A49_11348 No alias ethylene-responsive transcription factor erf010 0.02 Orthogroups_2024-Update
Brara.E02527.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Glyma.05G049800 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G092800 No alias cooperatively regulated by ethylene and jasmonate 1 0.03 Orthogroups_2024-Update
Glyma.13G216900 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G091560.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os07g47330 No alias AP2 domain containing protein, expressed 0.04 Orthogroups_2024-Update
Potri.012G032900 No alias cytokinin response factor 4 0.02 Orthogroups_2024-Update
Pp1s7_352V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Seita.7G176700.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G481400.1 No alias transcription factor component *(HRE/RAP2.12) of... 0.03 Orthogroups_2024-Update
Sobic.001G502300.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G084600.1 No alias cutin and suberin biosynthesis transcription factor... 0.03 Orthogroups_2024-Update
Sobic.004G331300.2 No alias subgroup ERF-V transcription factor 0.03 Orthogroups_2024-Update
Solyc02g077370 No alias Ethylene Response Factor C.5 0.03 Orthogroups_2024-Update
Solyc05g013540 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc06g068360 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Solyc07g042230 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.05 Orthogroups_2024-Update
Solyc09g089930 No alias ethylene responsive factor E.2 0.02 Orthogroups_2024-Update
Sopen03g037110 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen08g026910 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 14 63
No external refs found!