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  5. Glyma.13G192700

Glyma.13G192700


Description : hAT transposon superfamily


Gene families : OG_42_0000049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G192700
Cluster HCCA clusters: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G398024 No alias hAT dimerisation domain-containing protein 0.02 Orthogroups_2024-Update
Glyma.02G172500 No alias hAT transposon superfamily 0.03 Orthogroups_2024-Update
Glyma.04G163700 No alias hAT transposon superfamily 0.03 Orthogroups_2024-Update
Glyma.08G294500 No alias hAT transposon superfamily 0.03 Orthogroups_2024-Update
Glyma.12G152900 No alias hAT transposon superfamily 0.03 Orthogroups_2024-Update
Glyma.15G187500 No alias hAT dimerisation domain-containing protein 0.03 Orthogroups_2024-Update
PSME_00000841-RA No alias (at3g10050 : 81.3) first enzyme in the biosynthetic... 0.03 Orthogroups_2024-Update
PSME_00002788-RA No alias (at4g05160 : 161.0) Encodes a peroxisomal protein... 0.06 Orthogroups_2024-Update
PSME_00022489-RA No alias (at5g33406 : 99.0) hAT dimerisation domain-containing... 0.09 Orthogroups_2024-Update
PSME_00041324-RA No alias no hits & (original description: no original description) 0.08 Orthogroups_2024-Update
PSME_00052149-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Solyc03g063270 No alias No description available 0.03 Orthogroups_2024-Update
Solyc04g039680 No alias No description available 0.04 Orthogroups_2024-Update
Solyc04g074610 No alias No description available 0.04 Orthogroups_2024-Update
Solyc06g036530 No alias No description available 0.03 Orthogroups_2024-Update
Solyc06g048690 No alias No description available 0.03 Orthogroups_2024-Update
Solyc08g007470 No alias HAT transposon superfamily (AHRD V3.3 *** A0A061G5I4_THECC) 0.02 Orthogroups_2024-Update
Solyc12g070130 No alias HAT transposon superfamily (AHRD V3.3 *-* A0A061G5I4_THECC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007021 DUF659 218 366
IPR003656 Znf_BED 23 57
IPR008906 HATC_C_dom 583 658
No external refs found!