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  5. Sopen10g005070

Sopen10g005070


Description : bHLH-MYC and R2R3-MYB transcription factors N-terminal


Gene families : OG_42_0001653 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001653_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g005070
Cluster HCCA clusters: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
A4A49_42322 No alias transcription factor myc2 0.03 Orthogroups_2024-Update
Potri.001G142200 No alias Basic helix-loop-helix (bHLH) DNA-binding family protein 0.05 Orthogroups_2024-Update
Potri.014G103700 No alias Basic helix-loop-helix (bHLH) DNA-binding family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 270 315
IPR025610 MYC/MYB_N 28 203
No external refs found!