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  5. Sopen10g005200

Sopen10g005200


Description : Seven in absentia protein family


Gene families : OG_42_0000730 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000730_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g005200
Cluster HCCA clusters: Cluster_363

Target Alias Description ECC score Gene Family Method Actions
A4A49_14271 No alias e3 ubiquitin-protein ligase sinat3 0.03 Orthogroups_2024-Update
Bradi2g31640 No alias Protein with RING/U-box and TRAF-like domains 0.03 Orthogroups_2024-Update
Brara.H01506.1 No alias E3 ubiquitin ligase *(SINA) 0.02 Orthogroups_2024-Update
PSME_00037032-RA No alias (at3g61790 : 394.0) Protein with RING/U-box and... 0.02 Orthogroups_2024-Update
Seita.2G419400.1 No alias E3 ubiquitin ligase *(SINA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA InterProScan predictions
BP GO:0007275 multicellular organism development IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR018121 7-in-absentia-prot_TRAF-dom 97 296
No external refs found!