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  5. Glyma.13G220200

Glyma.13G220200


Description : RNI-like superfamily protein


Gene families : OG_42_0000249 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000249_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G220200
Cluster HCCA clusters: Cluster_377

Target Alias Description ECC score Gene Family Method Actions
At4g05490 No alias Putative F-box/LRR-repeat protein 22... 0.03 Orthogroups_2024-Update
HORVU6Hr1G077730.1 No alias regulatory protein *(FBW2) of RNA-induced silencing... 0.03 Orthogroups_2024-Update
Sopen11g004820 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 14 60
IPR001611 Leu-rich_rpt 109 127
IPR001611 Leu-rich_rpt 193 211
No external refs found!