Glyma.13G221400

Description : auxin response factor 8

Gene families : OG_42_0000050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000050_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.13G221400
Cluster	HCCA clusters: Cluster_151

Target	Alias	Description	ECC score	Gene Family Method
A4A49_41656	No alias	auxin response factor 9	0.03	Orthogroups_2024-Update
At5g62000	No alias	Auxin response factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JM3]	0.05	Orthogroups_2024-Update
Bradi1g32547	No alias	auxin response factor 6	0.03	Orthogroups_2024-Update
Bradi1g34340	No alias	Transcriptional factor B3 family protein /...	0.03	Orthogroups_2024-Update
Bradi1g46602	No alias	Transcriptional factor B3 family protein /...	0.03	Orthogroups_2024-Update
Brara.A01401.1	No alias	ARF-type transcription factor	0.05	Orthogroups_2024-Update
Brara.H01893.1	No alias	ARF-type transcription factor	0.04	Orthogroups_2024-Update
Brara.I02823.1	No alias	ARF-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G081158	No alias	auxin response factor 6	0.02	Orthogroups_2024-Update
GRMZM2G169820	No alias	Transcriptional factor B3 family protein /...	0.02	Orthogroups_2024-Update
GRMZM2G338259	No alias	auxin response factor 2	0.02	Orthogroups_2024-Update
Glyma.01G002100	No alias	Transcriptional factor B3 family protein /...	0.03	Orthogroups_2024-Update
Glyma.09G072200	No alias	Transcriptional factor B3 family protein /...	0.04	Orthogroups_2024-Update
Glyma.10G210600	No alias	auxin response factor 16	0.04	Orthogroups_2024-Update
Glyma.15G091000	No alias	auxin response factor 8	0.03	Orthogroups_2024-Update
Glyma.15G181000	No alias	auxin response factor 19	0.06	Orthogroups_2024-Update
Glyma.18G184500	No alias	auxin response factor 9	0.05	Orthogroups_2024-Update
Glyma.19G181900	No alias	auxin response factor 16	0.03	Orthogroups_2024-Update
LOC_Os01g48060	No alias	auxin response factor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os01g54990	No alias	auxin response factor, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g46410	No alias	auxin response factor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os12g29520	No alias	auxin response factor, putative, expressed	0.02	Orthogroups_2024-Update
PSME_00020341-RA	No alias	(at1g19220 : 630.0) Encodes an auxin response factor...	0.03	Orthogroups_2024-Update
Pp1s119_32V6	No alias	auxin response	0.03	Orthogroups_2024-Update
Pp1s133_56V6	No alias	auxin response factor 8	0.02	Orthogroups_2024-Update
Pp1s14_392V6	No alias	arf1-binding protein	0.03	Orthogroups_2024-Update
Pp1s64_138V6	No alias	arf1-binding protein	0.02	Orthogroups_2024-Update
Pp1s86_1V6	No alias	auxin response	0.02	Orthogroups_2024-Update
Seita.3G147000.1	No alias	ARF-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.010G073600.1	No alias	ARF-type transcription factor & auxin signal mediator...	0.01	Orthogroups_2024-Update
Solyc08g008380	No alias	Auxin Response Factor 9B	0.05	Orthogroups_2024-Update
Sopen00g003680	No alias	Auxin response factor	0.02	Orthogroups_2024-Update
Sopen01g039790	No alias	AUX/IAA family	0.02	Orthogroups_2024-Update
Sopen03g037200	No alias	Auxin response factor	0.03	Orthogroups_2024-Update
Sopen04g034850	No alias	Auxin response factor	0.03	Orthogroups_2024-Update
Sopen09g002650	No alias	Auxin response factor	0.02	Orthogroups_2024-Update
Sopen11g028210	No alias	Auxin response factor	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	IEA	InterProScan predictions
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003774	motor activity	IEP	Predicted GO
MF	GO:0003777	microtubule motor activity	IEP	Predicted GO
MF	GO:0003916	DNA topoisomerase activity	IEP	Predicted GO
MF	GO:0003917	DNA topoisomerase type I activity	IEP	Predicted GO
MF	GO:0003989	acetyl-CoA carboxylase activity	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
MF	GO:0005524	ATP binding	IEP	Predicted GO
CC	GO:0005694	chromosome	IEP	Predicted GO
BP	GO:0006265	DNA topological change	IEP	Predicted GO
BP	GO:0006928	movement of cell or subcellular component	IEP	Predicted GO
BP	GO:0007017	microtubule-based process	IEP	Predicted GO
BP	GO:0007018	microtubule-based movement	IEP	Predicted GO
MF	GO:0008017	microtubule binding	IEP	Predicted GO
MF	GO:0008092	cytoskeletal protein binding	IEP	Predicted GO
MF	GO:0008144	drug binding	IEP	Predicted GO
MF	GO:0008289	lipid binding	IEP	Predicted GO
BP	GO:0010215	cellulose microfibril organization	IEP	Predicted GO
MF	GO:0015631	tubulin binding	IEP	Predicted GO
BP	GO:0016049	cell growth	IEP	Predicted GO
MF	GO:0016421	CoA carboxylase activity	IEP	Predicted GO
MF	GO:0016885	ligase activity, forming carbon-carbon bonds	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
BP	GO:0030198	extracellular matrix organization	IEP	Predicted GO
MF	GO:0030554	adenyl nucleotide binding	IEP	Predicted GO
CC	GO:0031225	anchored component of membrane	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predicted GO
MF	GO:0035091	phosphatidylinositol binding	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
BP	GO:0040007	growth	IEP	Predicted GO
BP	GO:0043062	extracellular structure organization	IEP	Predicted GO
MF	GO:0043168	anion binding	IEP	Predicted GO
BP	GO:0071103	DNA conformation change	IEP	Predicted GO
MF	GO:0097367	carbohydrate derivative binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	127	228
IPR010525	Auxin_resp	253	336
IPR033389	AUX/IAA_dom	760	848

External Links

No external refs found!

Glyma.13G221400

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation