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  5. Glyma.13G222100

Glyma.13G222100


Description : senescence-related gene 1


Gene families : OG_42_0000290 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000290_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G222100
Cluster HCCA clusters: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
A4A49_04229 No alias protein srg1 0.03 Orthogroups_2024-Update
At3g21420 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.03 Orthogroups_2024-Update
Glyma.02G125000 No alias senescence-related gene 1 0.03 Orthogroups_2024-Update
Glyma.13G263800 No alias senescence-related gene 1 0.04 Orthogroups_2024-Update
Sobic.003G143000.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 208 304
IPR026992 DIOX_N 54 161
No external refs found!