1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen10g005440

Sopen10g005440


Description : GH3 auxin-responsive promoter


Gene families : OG_42_0000128 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g005440
Cluster HCCA clusters: Cluster_273

Target Alias Description ECC score Gene Family Method Actions
Brara.A01696.1 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00047176-RA No alias (at2g14960 : 265.0) encodes a protein similar to... 0.02 Orthogroups_2024-Update
Solyc05g050290 No alias LOW QUALITY:Auxin-responsive GH3 family protein (AHRD... 0.04 Orthogroups_2024-Update
Solyc10g008520 No alias Auxin-responsive GH3 family protein (AHRD V3.3 *** AT4G03400.2) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004993 GH3 221 744
IPR004993 GH3 766 1287
No external refs found!