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  5. Glyma.13G232000

Glyma.13G232000


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0009668 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009668_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G232000
Cluster HCCA clusters: Cluster_289

Target Alias Description ECC score Gene Family Method Actions
HORVU6Hr1G005380.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Potri.004G054000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Predicted GO
BP GO:0006144 purine nucleobase metabolic process IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
BP GO:0009113 purine nucleobase biosynthetic process IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 177 207
IPR002885 Pentatricopeptide_repeat 341 367
IPR002885 Pentatricopeptide_repeat 313 340
IPR002885 Pentatricopeptide_repeat 415 441
IPR002885 Pentatricopeptide_repeat 210 232
IPR002885 Pentatricopeptide_repeat 377 404
IPR002885 Pentatricopeptide_repeat 103 146
IPR002885 Pentatricopeptide_repeat 236 284
No external refs found!