Glyma.13G243100

Description : Translation protein SH3-like family protein

Gene families : OG_42_0002250 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002250_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.13G243100
Cluster	HCCA clusters: Cluster_129

Target	Alias	Description	ECC score	Gene Family Method
227399	No alias	Translation protein SH3-like family protein	0.07	Orthogroups_2024-Update
A4A49_64025	No alias	60s ribosomal protein l26-1	0.04	Orthogroups_2024-Update
Brara.A02158.1	No alias	component *(uL24) of large ribosomal-subunit (LSU) proteome	0.07	Orthogroups_2024-Update
Brara.C04297.1	No alias	component *(uL24) of large ribosomal-subunit (LSU) proteome	0.09	Orthogroups_2024-Update
Brara.I03333.1	No alias	component *(uL24) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Cre01.g040000	No alias	Translation protein SH3-like family protein	0.08	Orthogroups_2024-Update
Glyma.11G048100	No alias	Translation protein SH3-like family protein	0.05	Orthogroups_2024-Update
HORVU3Hr1G026880.1	No alias	component *(uL24) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Kfl00486_0110	kfl00486_0110_v1.1	(at3g49910 : 157.0) Translation protein SH3-like family...	0.05	Orthogroups_2024-Update
Mp2g12870.1	No alias	component RPL26 of LSU proteome component	0.04	Orthogroups_2024-Update
PSME_00027135-RA	No alias	(at5g67510 : 172.0) Translation protein SH3-like family...	0.03	Orthogroups_2024-Update
Potri.007G055900	No alias	Translation protein SH3-like family protein	0.05	Orthogroups_2024-Update
Pp1s120_90V6	No alias	putative ribosomal protein L26 [Oryza sativa (japonica...	0.07	Orthogroups_2024-Update
Pp1s13_138V6	No alias	60s ribosomal protein	0.07	Orthogroups_2024-Update
Pp1s30_298V6	No alias	60s ribosomal protein	0.08	Orthogroups_2024-Update
Pp1s69_191V6	No alias	putative ribosomal protein L26 [Oryza sativa (japonica...	0.06	Orthogroups_2024-Update
Seita.5G096600.1	No alias	component *(uL24) of large ribosomal-subunit (LSU) proteome	0.1	Orthogroups_2024-Update
Sobic.003G078200.1	No alias	component *(uL24) of large ribosomal-subunit (LSU) proteome	0.07	Orthogroups_2024-Update
Solyc02g064670	No alias	60S ribosomal protein L26-1 (AHRD V3.3 *** RL261_ARATH)	0.06	Orthogroups_2024-Update
Solyc02g092430	No alias	60S ribosomal protein L26-1 (AHRD V3.3 *** RL261_ARATH)	0.08	Orthogroups_2024-Update
Solyc03g044000	No alias	60S ribosomal protein L26-1 (AHRD V3.3 *** RL261_ARATH)	0.07	Orthogroups_2024-Update
Sopen02g014760	No alias	KOW motif	0.06	Orthogroups_2024-Update
Sopen02g036980	No alias	KOW motif	0.05	Orthogroups_2024-Update
evm.model.contig_2053.5	No alias	(at5g67510 : 146.0) Translation protein SH3-like family...	0.1	Orthogroups_2024-Update
evm.model.tig00000144.60	No alias	(at3g49910 : 158.0) Translation protein SH3-like family...	0.09	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0015934	large ribosomal subunit	IEA	InterProScan predictions
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044391	ribosomal subunit	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Predicted GO
MF	GO:0003954	NADH dehydrogenase activity	IEP	Predicted GO
CC	GO:0005622	intracellular	IEP	Predicted GO
CC	GO:0005840	ribosome	IEP	Predicted GO
BP	GO:0006260	DNA replication	IEP	Predicted GO
BP	GO:0006275	regulation of DNA replication	IEP	Predicted GO
BP	GO:0006364	rRNA processing	IEP	Predicted GO
BP	GO:0007062	sister chromatid cohesion	IEP	Predicted GO
BP	GO:0007064	mitotic sister chromatid cohesion	IEP	Predicted GO
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	Predicted GO
BP	GO:0016072	rRNA metabolic process	IEP	Predicted GO
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Predicted GO
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	Predicted GO
BP	GO:0022402	cell cycle process	IEP	Predicted GO
CC	GO:0030684	preribosome	IEP	Predicted GO
MF	GO:0031072	heat shock protein binding	IEP	Predicted GO
CC	GO:0031390	Ctf18 RFC-like complex	IEP	Predicted GO
CC	GO:0032040	small-subunit processome	IEP	Predicted GO
MF	GO:0034061	DNA polymerase activity	IEP	Predicted GO
CC	GO:0043226	organelle	IEP	Predicted GO
CC	GO:0043228	non-membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043229	intracellular organelle	IEP	Predicted GO
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Predicted GO
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	Predicted GO
BP	GO:0051052	regulation of DNA metabolic process	IEP	Predicted GO
MF	GO:0051082	unfolded protein binding	IEP	Predicted GO
BP	GO:0051276	chromosome organization	IEP	Predicted GO
BP	GO:0090304	nucleic acid metabolic process	IEP	Predicted GO
BP	GO:1903047	mitotic cell cycle process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR005824	KOW	53	82
IPR005756	Ribosomal_L26/L24P_euk/arc	8	121

External Links

No external refs found!

Glyma.13G243100

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation