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  5. Sopen10g005560

Sopen10g005560


Description : CAAD domains of cyanobacterial aminoacyl-tRNA synthetase


Gene families : OG_42_0000658 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000658_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g005560
Cluster HCCA clusters: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
Bradi1g43950 No alias Function unknown 0.04 Orthogroups_2024-Update
Bradi3g32100 No alias photosystem I P subunit 0.02 Orthogroups_2024-Update
Brara.B02547.1 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.04 Orthogroups_2024-Update
Glyma.07G019400 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.16G017600 No alias photosystem I P subunit 0.03 Orthogroups_2024-Update
Kfl00792_0030 kfl00792_0030_v1.1 (at1g52220 : 111.0) FUNCTIONS IN: molecular_function... 0.03 Orthogroups_2024-Update
LOC_Os02g52260 No alias expressed protein 0.03 Orthogroups_2024-Update
Mp6g20800.1 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.02 Orthogroups_2024-Update
Mp6g20860.1 No alias Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.02 Orthogroups_2024-Update
Potri.002G166800 No alias Function unknown 0.03 Orthogroups_2024-Update
Potri.014G093900 No alias Function unknown 0.05 Orthogroups_2024-Update
Pp1s212_34V6 No alias threonine endopeptidase 0.03 Orthogroups_2024-Update
Seita.1G308600.1 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.04 Orthogroups_2024-Update
Seita.4G117700.1 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.05 Orthogroups_2024-Update
Seita.5G326400.1 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.04 Orthogroups_2024-Update
Solyc06g066620 No alias Thylakoid membrane phosphoprotein, chloroplastic (AHRD... 0.06 Orthogroups_2024-Update
evm.model.tig00000900.28 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025564 CAAD_dom 84 167
No external refs found!