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  5. Glyma.13G244300

Glyma.13G244300


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_42_0001613 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001613_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G244300
Cluster HCCA clusters: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
A4A49_26826 No alias katanin p80 wd40 repeat-containing subunit b1-like protein 0.04 Orthogroups_2024-Update
GRMZM5G842970 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.011G045500 No alias Transducin/WD40 repeat-like superfamily protein 0.05 Orthogroups_2024-Update
Seita.5G340100.1 No alias regulatory component *(KTN80) of Katanin ATP-dependent... 0.06 Orthogroups_2024-Update
Solyc02g078800 No alias Katanin p80 WD40 repeat-containing subunit B1 homolog... 0.03 Orthogroups_2024-Update
Sopen02g023620 No alias WD domain, G-beta repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 134 170
IPR001680 WD40_repeat 50 86
IPR001680 WD40_repeat 7 43
IPR001680 WD40_repeat 92 128
IPR001680 WD40_repeat 174 212
IPR028021 Katanin_C-terminal 663 821
No external refs found!