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  5. Glyma.13G247400

Glyma.13G247400


Description : Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase


Gene families : OG_42_0000491 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000491_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G247400
Cluster HCCA clusters: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
At1g11950 No alias Transcription factor jumonji (JmjC) domain-containing... 0.04 Orthogroups_2024-Update
At1g62310 No alias Transcription factor jumonji (JmjC) domain-containing... 0.04 Orthogroups_2024-Update
At4g00990 No alias Transcription factor jumonji (JmjC) domain-containing... 0.04 Orthogroups_2024-Update
Brara.C02867.1 No alias histone demethylase *(KDM3) 0.04 Orthogroups_2024-Update
Brara.I00073.1 No alias histone demethylase *(KDM3) 0.04 Orthogroups_2024-Update
GRMZM2G428933 No alias Zinc finger, RING-type;Transcription factor... 0.03 Orthogroups_2024-Update
Glyma.06G325600 No alias transcription factor jumonji (jmjC) domain-containing protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G005010.1 No alias histone demethylase *(KDM3) 0.04 Orthogroups_2024-Update
MA_126442g0010 No alias (at4g00990 : 306.0) Transcription factor jumonji (jmjC)... 0.03 Orthogroups_2024-Update
PSME_00031682-RA No alias (at4g00990 : 191.0) Transcription factor jumonji (jmjC)... 0.04 Orthogroups_2024-Update
Seita.1G376400.1 No alias histone demethylase *(KDM3) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003347 JmjC_dom 800 897
IPR014977 WRC_dom 15 55
No external refs found!