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  5. Glyma.13G248000

Glyma.13G248000


Description : B-box type zinc finger family protein


Gene families : OG_42_0000803 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000803_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G248000
Cluster HCCA clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
A4A49_09731 No alias b-box domain protein 31 0.03 Orthogroups_2024-Update
MA_10430891g0010 No alias (at4g27310 : 113.0) B-box type zinc finger family... 0.02 Orthogroups_2024-Update
MA_10432136g0020 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Seita.1G067400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G043200.1 No alias BBX class-V transcription factor 0.03 Orthogroups_2024-Update
Solyc12g005660 No alias Zinc finger, B-box (AHRD V3.3 *-* A0A103Y7X2_CYNCS) 0.03 Orthogroups_2024-Update
Solyc12g005750 No alias LOW QUALITY:Zinc finger protein CONSTANS-LIKE 14 (AHRD... 0.02 Orthogroups_2024-Update
Sopen07g026690 No alias B-box zinc finger 0.02 Orthogroups_2024-Update
Sopen12g001590 No alias B-box zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000315 Znf_B-box 2 43
No external refs found!