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  5. Glyma.13G250900

Glyma.13G250900


Description : Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase


Gene families : OG_42_0002077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002077_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G250900
Cluster HCCA clusters: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
A4A49_27658 No alias putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 0.04 Orthogroups_2024-Update
Bradi1g32490 No alias Ribonuclease E inhibitor RraA/Dimethylmenaquinone... 0.03 Orthogroups_2024-Update
Brara.C00724.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.15G063400 No alias Ribonuclease E inhibitor RraA/Dimethylmenaquinone... 0.03 Orthogroups_2024-Update
PSME_00045055-RA No alias (at5g56260 : 189.0) Ribonuclease E inhibitor... 0.03 Orthogroups_2024-Update
Potri.019G053800 No alias Ribonuclease E inhibitor RraA/Dimethylmenaquinone... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005493 RraA/RraA-like 43 196
No external refs found!