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  5. Glyma.13G252600

Glyma.13G252600


Description : pathogenesis-related protein-1-like


Gene families : OG_42_0000094 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000094_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G252600
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
A4A49_09374 No alias sts14 protein 0.03 Orthogroups_2024-Update
A4A49_13127 No alias pathogenesis-related protein 1a 0.04 Orthogroups_2024-Update
A4A49_20434 No alias pathogenesis-related protein 1b 0.04 Orthogroups_2024-Update
A4A49_38413 No alias pathogenesis-related leaf protein 4 0.01 Orthogroups_2024-Update
At5g02730 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 Orthogroups_2024-Update
Brara.C04098.1 No alias CAPE precursor polypeptide 0.03 Orthogroups_2024-Update
Brara.G00102.1 No alias CAPE precursor polypeptide 0.03 Orthogroups_2024-Update
GRMZM5G852886 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Orthogroups_2024-Update
Glyma.07G186200 No alias basic pathogenesis-related protein 1 0.03 Orthogroups_2024-Update
Glyma.17G066000 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Orthogroups_2024-Update
LOC_Os02g54540 No alias SCP-like extracellular protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g22220 No alias SCP-like extracellular protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g03730 No alias SCP-like extracellular protein, expressed 0.02 Orthogroups_2024-Update
Potri.001G288400 No alias pathogenesis-related gene 1 0.03 Orthogroups_2024-Update
Seita.3G119500.1 No alias CAPE precursor polypeptide 0.02 Orthogroups_2024-Update
Seita.9G104900.1 No alias CAPE precursor polypeptide 0.03 Orthogroups_2024-Update
Sobic.002G105300.1 No alias CAPE precursor polypeptide 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR014044 CAP_domain 33 149
No external refs found!