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  5. Glyma.13G263800

Glyma.13G263800


Description : senescence-related gene 1


Gene families : OG_42_0000290 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000290_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G263800
Cluster HCCA clusters: Cluster_438

Target Alias Description ECC score Gene Family Method Actions
Bradi2g60070 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.02 Orthogroups_2024-Update
Glyma.01G056100 No alias senescence-related gene 1 0.03 Orthogroups_2024-Update
Glyma.12G235100 No alias senescence-related gene 1 0.04 Orthogroups_2024-Update
Glyma.13G222100 No alias senescence-related gene 1 0.04 Orthogroups_2024-Update
LOC_Os01g24980 No alias naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g25010 No alias flavonol synthase/flavanone 3-hydroxylase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g63900 No alias 1-aminocyclopropane-1-carboxylate oxidase 2, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g40990 No alias flavonol synthase/flavanone 3-hydroxylase, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00021441-RA No alias (at3g21420 : 219.0) 2-oxoglutarate (2OG) and... 0.04 Orthogroups_2024-Update
PSME_00033225-RA No alias (at3g21420 : 252.0) 2-oxoglutarate (2OG) and... 0.04 Orthogroups_2024-Update
Seita.9G324600.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Sobic.002G087800.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Sopen01g029570 No alias non-haem dioxygenase in morphine synthesis N-terminal 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
CC GO:0019008 molybdopterin synthase complex IEP Predicted GO
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043545 molybdopterin cofactor metabolic process IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0051189 prosthetic group metabolic process IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 209 308
IPR026992 DIOX_N 54 158
No external refs found!