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  5. Glyma.13G268300

Glyma.13G268300


Description : DNA-directed DNA polymerases


Gene families : OG_42_0004400 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004400_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G268300
Cluster HCCA clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
At1g78650 No alias DNA-directed DNA polymerase [Source:UniProtKB/TrEMBL;Acc:Q9SYL7] 0.03 Orthogroups_2024-Update
Brara.G03601.1 No alias component *(POLD3) of DNA polymerase delta complex 0.03 Orthogroups_2024-Update
Solyc10g007400 No alias DNA polymerase delta subunit 3 (AHRD V3.3 *** A0A0B0NMF9_GOSAR) 0.03 Orthogroups_2024-Update
Sopen10g003230 No alias DNA polymerase subunit Cdc27 0.03 Orthogroups_2024-Update
evm.model.tig00020554.132 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006260 DNA replication IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR019038 DNA_polymerase_subunit_Cdc27 23 248
No external refs found!