Glyma.13G271300


Description : ABC-2 type transporter family protein


Gene families : OG_42_0000830 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000830_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G271300
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Bradi5g27650 No alias ABC-2 type transporter family protein 0.03 Orthogroups_2024-Update
MA_10426701g0030 No alias (at2g13610 : 490.0) ABC-2 type transporter family... 0.03 Orthogroups_2024-Update
Pp1s112_116V6 No alias white-brown-complex abc transporter family 0.03 Orthogroups_2024-Update
Seita.3G000700.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 64 215
IPR013525 ABC_2_trans 347 558
No external refs found!