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  5. Glyma.13G280300

Glyma.13G280300


Description : ribosomal protein L5 B


Gene families : OG_42_0001609 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001609_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Glycine release: Glyma.13G280300
Cluster HCCA clusters: Cluster_426

Target Alias Description ECC score Gene Family Method Actions
144921 No alias ribosomal protein L5 0.06 Orthogroups_2024-Update
A4A49_19400 No alias 60s ribosomal protein l5 0.08 Orthogroups_2024-Update
Bradi1g13630 No alias ribosomal protein L5 B 0.06 Orthogroups_2024-Update
Bradi4g13640 No alias ribosomal protein L5 0.09 Orthogroups_2024-Update
Brara.C04001.1 No alias component *(uL18) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Brara.C04002.1 No alias component *(uL18) of large ribosomal-subunit (LSU) proteome 0.12 Orthogroups_2024-Update
Brara.F03014.1 No alias component *(uL18) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.G00424.1 No alias component *(uL18) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Cre14.g621450 No alias ribosomal protein L5 B 0.04 Orthogroups_2024-Update
GRMZM5G815894 No alias ribosomal protein L5 0.03 Orthogroups_2024-Update
Glyma.16G028800 No alias ribosomal protein L5 B 0.04 Orthogroups_2024-Update
HORVU5Hr1G092630.1 No alias component *(uL18) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
LOC_Os01g67134 No alias ribosomal L18p/L5e family protein, putative, expressed 0.05 Orthogroups_2024-Update
MA_70965g0010 No alias (q6unt2|rl5_cucsa : 417.0) 60S ribosomal protein L5 -... 0.06 Orthogroups_2024-Update
Mp4g15800.1 No alias component RPL5 of LSU proteome component 0.03 Orthogroups_2024-Update
Potri.014G174000 No alias ribosomal protein L5 B 0.03 Orthogroups_2024-Update
Potri.019G099000 No alias ribosomal protein L5 B 0.03 Orthogroups_2024-Update
Pp1s364_3V6 No alias ribosomal protein 0.05 Orthogroups_2024-Update
Pp1s38_329V6 No alias ribosomal protein 0.11 Orthogroups_2024-Update
Pp1s97_115V6 No alias ribosomal protein 0.07 Orthogroups_2024-Update
Seita.5G413500.1 No alias component *(uL18) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Sobic.003G387900.1 No alias component *(uL18) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
Solyc06g007670 No alias 60S ribosomal protein L5 (AHRD V3.3 *** RL5_CUCSA) 0.09 Orthogroups_2024-Update
Solyc06g082870 No alias 60S ribosomal protein L5-like protein (AHRD V3.3 ***... 0.11 Orthogroups_2024-Update
Solyc09g020130 No alias 60S ribosomal protein L5 (AHRD V3.3 *** RL5_CUCSA) 0.05 Orthogroups_2024-Update
Sopen06g034230 No alias Ribosomal L18p/L5e family 0.06 Orthogroups_2024-Update
evm.model.contig_3443.5 No alias (q6unt2|rl5_cucsa : 302.0) 60S ribosomal protein L5 -... 0.12 Orthogroups_2024-Update
evm.model.tig00000194.49 No alias (o65353|rl5_helan : 322.0) 60S ribosomal protein L5 -... 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
MF GO:0008097 5S rRNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0004615 phosphomannomutase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
BP GO:0009225 nucleotide-sugar metabolic process IEP Predicted GO
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Predicted GO
BP GO:0009298 GDP-mannose biosynthetic process IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0019673 GDP-mannose metabolic process IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025607 Rbsml_L5e/L18P_C 191 280
IPR005485 Rbsml_L5_euk/L18_arc 14 175
No external refs found!