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  5. Glyma.13G293200

Glyma.13G293200


Description : RAB GTPase homolog A1F


Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G293200
Cluster HCCA clusters: Cluster_310

Target Alias Description ECC score Gene Family Method Actions
Brara.J00061.1 No alias A-class RAB GTPase 0.03 Orthogroups_2024-Update
Brara.J01296.1 No alias A-class RAB GTPase 0.03 Orthogroups_2024-Update
GRMZM2G052509 No alias RAB GTPase homolog A3 0.02 Orthogroups_2024-Update
LOC_Os01g54590 No alias ras-related protein, putative, expressed 0.03 Orthogroups_2024-Update
Mp3g12050.1 No alias A-class RAB GTPase 0.02 Orthogroups_2024-Update
Seita.3G070500.1 No alias A-class RAB GTPase 0.03 Orthogroups_2024-Update
Solyc11g010100 No alias Ras-related protein Rab11D (AHRD V3.3 *** RB11D_TOBAC) 0.03 Orthogroups_2024-Update
Sopen07g026930 No alias Ras family 0.02 Orthogroups_2024-Update
Sopen12g005850 No alias Ras family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000930 gamma-tubulin complex IEP Predicted GO
CC GO:0000931 gamma-tubulin large complex IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
CC GO:0008274 gamma-tubulin ring complex IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0031503 protein-containing complex localization IEP Predicted GO
BP GO:0033566 gamma-tubulin complex localization IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0034629 cellular protein-containing complex localization IEP Predicted GO
CC GO:0044450 microtubule organizing center part IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
InterPro domains Description Start Stop
IPR001806 Small_GTPase 12 172
No external refs found!