1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.13G321600

Glyma.13G321600


Description : Histone superfamily protein


Gene families : OG_42_0000153 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000153_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G321600
Cluster HCCA clusters: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
At3g45980 No alias Histone H2B [Source:UniProtKB/TrEMBL;Acc:A0A178V9F6] 0.03 Orthogroups_2024-Update
Brara.B01057.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
Brara.F01827.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
Brara.I03652.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
Cre06.g273850 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre12.g504550 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre12.g504700 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre12.g506200 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre13.g570050 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g708600 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G046841 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G071959 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G306258 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G472696 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.10G198500 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.11G141800 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.12G065100 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.12G065200 No alias Histone superfamily protein 0.06 Orthogroups_2024-Update
Glyma.12G065400 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.20G191600 No alias Histone superfamily protein 0.06 Orthogroups_2024-Update
HORVU1Hr1G058440.4 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
HORVU1Hr1G085540.1 No alias histone *(H2B) 0.04 Orthogroups_2024-Update
HORVU3Hr1G013530.1 No alias histone *(H2B) 0.05 Orthogroups_2024-Update
HORVU3Hr1G013680.1 No alias histone *(H2B) 0.02 Orthogroups_2024-Update
HORVU7Hr1G110310.1 No alias histone *(H2B) 0.02 Orthogroups_2024-Update
MA_17795g0010 No alias (o22582|h2b_goshi : 174.0) Histone H2B - Gossypium... 0.03 Orthogroups_2024-Update
Pp1s56_226V6 No alias histone h2b 0.05 Orthogroups_2024-Update
Solyc06g005390 No alias Histone H2B (AHRD V3.3 *** K4C323_SOLLC) 0.03 Orthogroups_2024-Update
Solyc06g074780 No alias Histone H2B (AHRD V3.3 *** K4C9J5_SOLLC) 0.02 Orthogroups_2024-Update
Sopen11g003800 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 6 109
No external refs found!