Description : Histone superfamily protein
Gene families : OG_42_0000153 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000153_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.13G321600 | |
Cluster | HCCA clusters: Cluster_92 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At3g45980 | No alias | Histone H2B [Source:UniProtKB/TrEMBL;Acc:A0A178V9F6] | 0.03 | Orthogroups_2024-Update | |
Brara.B01057.1 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
Brara.F01827.1 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
Brara.I03652.1 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
Cre06.g273850 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre12.g504550 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre12.g504700 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre12.g506200 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre13.g570050 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre17.g708600 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G046841 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
GRMZM2G071959 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
GRMZM2G306258 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G472696 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.10G198500 | No alias | Histone superfamily protein | 0.05 | Orthogroups_2024-Update | |
Glyma.11G141800 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.12G065100 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.12G065200 | No alias | Histone superfamily protein | 0.06 | Orthogroups_2024-Update | |
Glyma.12G065400 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.20G191600 | No alias | Histone superfamily protein | 0.06 | Orthogroups_2024-Update | |
HORVU1Hr1G058440.4 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
HORVU1Hr1G085540.1 | No alias | histone *(H2B) | 0.04 | Orthogroups_2024-Update | |
HORVU3Hr1G013530.1 | No alias | histone *(H2B) | 0.05 | Orthogroups_2024-Update | |
HORVU3Hr1G013680.1 | No alias | histone *(H2B) | 0.02 | Orthogroups_2024-Update | |
HORVU7Hr1G110310.1 | No alias | histone *(H2B) | 0.02 | Orthogroups_2024-Update | |
MA_17795g0010 | No alias | (o22582|h2b_goshi : 174.0) Histone H2B - Gossypium... | 0.03 | Orthogroups_2024-Update | |
Pp1s56_226V6 | No alias | histone h2b | 0.05 | Orthogroups_2024-Update | |
Solyc06g005390 | No alias | Histone H2B (AHRD V3.3 *** K4C323_SOLLC) | 0.03 | Orthogroups_2024-Update | |
Solyc06g074780 | No alias | Histone H2B (AHRD V3.3 *** K4C9J5_SOLLC) | 0.02 | Orthogroups_2024-Update | |
Sopen11g003800 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | InterProScan predictions |
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | Predicted GO |
MF | GO:0003690 | double-stranded DNA binding | IEP | Predicted GO |
MF | GO:0004367 | glycerol-3-phosphate dehydrogenase [NAD+] activity | IEP | Predicted GO |
MF | GO:0004568 | chitinase activity | IEP | Predicted GO |
BP | GO:0006022 | aminoglycan metabolic process | IEP | Predicted GO |
BP | GO:0006026 | aminoglycan catabolic process | IEP | Predicted GO |
BP | GO:0006030 | chitin metabolic process | IEP | Predicted GO |
BP | GO:0006032 | chitin catabolic process | IEP | Predicted GO |
BP | GO:0006040 | amino sugar metabolic process | IEP | Predicted GO |
BP | GO:0006298 | mismatch repair | IEP | Predicted GO |
MF | GO:0008061 | chitin binding | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
BP | GO:0009451 | RNA modification | IEP | Predicted GO |
BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
MF | GO:0030983 | mismatched DNA binding | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
BP | GO:0042737 | drug catabolic process | IEP | Predicted GO |
BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
BP | GO:0046348 | amino sugar catabolic process | IEP | Predicted GO |
BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | Predicted GO |
BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Predicted GO |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007125 | Histone_H2A/H2B/H3 | 6 | 109 |
No external refs found! |