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Description : PPR repeat family
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Sopen10g006390 | |
| Cluster | HCCA clusters: Cluster_98 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 26786 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| 76916 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| 82255 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| A4A49_18851 | No alias | pentatricopeptide repeat-containing protein | 0.04 | Orthogroups_2024-Update | |
| A4A49_38131 | No alias | pentatricopeptide repeat-containing protein | 0.03 | Orthogroups_2024-Update | |
| Brara.F01301.1 | No alias | RNA editing factor *(OTP970) | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G045154 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
| GRMZM2G320723 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G481373 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.01G011300 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Glyma.03G264700 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.09G168800 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.09G286100 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.14G194400 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| HORVU0Hr1G018170.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU3Hr1G061610.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| LOC_Os03g27880 | No alias | tetratricopeptide-like helical, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os03g32620 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_135075g0020 | No alias | (at3g57430 : 714.0) Encodes a chloroplast RNA editing... | 0.03 | Orthogroups_2024-Update | |
| MA_20746g0010 | No alias | (at1g11290 : 522.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| MA_27147g0010 | No alias | (at3g49170 : 606.0) embryo defective 2261 (EMB2261);... | 0.03 | Orthogroups_2024-Update | |
| MA_385322g0010 | No alias | (at1g08070 : 385.0) Encodes a chloroplast RNA editing... | 0.04 | Orthogroups_2024-Update | |
| MA_465411g0010 | No alias | (at4g18750 : 483.0) Encodes a pentatricopeptide (PPR)... | 0.03 | Orthogroups_2024-Update | |
| MA_64083g0010 | No alias | (at1g11290 : 632.0) Pentatricopeptide Repeat Protein... | 0.02 | Orthogroups_2024-Update | |
| MA_653417g0010 | No alias | (at4g13650 : 731.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| MA_755187g0010 | No alias | (at4g02750 : 577.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
| MA_7907g0020 | No alias | (at3g57430 : 717.0) Encodes a chloroplast RNA editing... | 0.04 | Orthogroups_2024-Update | |
| MA_94165g0010 | No alias | (at1g11290 : 612.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| PSME_00005903-RA | No alias | (at2g22070 : 612.0) pentatricopeptide (PPR)... | 0.02 | Orthogroups_2024-Update | |
| PSME_00017819-RA | No alias | (at3g03580 : 689.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| PSME_00036565-RA | No alias | (at4g18750 : 575.0) Encodes a pentatricopeptide (PPR)... | 0.04 | Orthogroups_2024-Update | |
| Seita.5G242100.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.003G277100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G398900.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G174800.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G199400.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G272600.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.008G047100.1 | No alias | RNA editing factor *(REME2/PGL1) | 0.02 | Orthogroups_2024-Update | |
| Solyc08g076150 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |